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Series GSE92978 Query DataSets for GSE92978
Status Public on Dec 29, 2016
Title The Microbial Gene Diversity along time and space of the wastewater treatment plant
Platform organisms Bacteria; Archaea; Eukaryota; Viruses
Sample organism uncultured bacterium
Experiment type Other
Summary Bacteriophage – host dynamics and interactions are important for microbial community composition and ecosystem function. Nonetheless, empirical evidence in engineered environment is scarce. Here, we examined phage and prokaryotic community composition of four anaerobic digestors in full-scale wastewater treatment plants (WWTPs) across China. Despite relatively stable process performance in biogas production, both phage and prokaryotic groups fluctuated monthly over a year of study period. Nonetheless, there were significant correlations in their α- and β-diversities between phage and prokaryotes. Phages explained 40.6% of total prokaryotic community composition, much higher than the explainable power by abiotic factors (14.5%). Consequently, phages were significantly (P<0.010) linked to parameters related to process performance including biogas production and volatile solid concentrations. Association network analyses showed that phage-prokaryote pairs were deeply rooted, and two network modules were exclusively comprised of phages, suggesting a possibility of co-infection. Those results collectively demonstrate phages as a major biotic factor in controlling bacterial composition. Therefore, phages may play a larger role in shaping prokaryotic dynamics and process performance of WWTPs than currently appreciated, enabling reliable prediction of microbial communities across time and space.
 
Overall design 48 samples were monthly collected from 4 anaerobic tanks in 3 wastewater treatment plants (Ninghai WWTP has 2 tank applying mesophilic and thermophilic technology respectively) during a year.
 
Contributor(s) Yang Y, Zhang Q
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Submission date Dec 28, 2016
Last update date Dec 29, 2016
Contact name Tengxu Wang
E-mail(s) zqt16@mails.tsinghua.edu.cn
Organization name Tsinghua University
Department School of Environment
Lab 925
Street address Tsinghua Yuan Street, No.1
City Beijing
ZIP/Postal code 100084
Country China
 
Platforms (1)
GPL22866 Geochip 5.0
Samples (48)
GSM2441333 BJ10
GSM2441334 BJ11
GSM2441335 BJ12
Relations
BioProject PRJNA359209

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92978_WWTP_data.txt.gz 17.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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