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Series GSE93317 Query DataSets for GSE93317
Status Public on Jan 10, 2017
Title Ralstonia solanacearum strain GMI1000: Methylation profile
Organism Ralstonia solanacearum
Experiment type Methylation profiling by high throughput sequencing
Summary The aim of the project is to decipher the role of DNA methylation in the plant pathogenic bacteria Ralstonia solanacearum during host adaptation. As a first step, we present here the DNA methylation profile of the GMI1000 reference strain.
 
Overall design Ralstonia solanacearum GMI1000 methylome
 
Contributor(s) Vandecasteele C, Legrand L, Guidot A
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BioProject PRJNA360383
Submission date Jan 09, 2017
Last update date May 15, 2019
Contact name Ludovic Legrand
E-mail(s) ludovic.legrand@inra.fr
Organization name INRA/CNRS
Lab Laboratoire des Interactions Plantes-Microrganismes (LIPM)
Street address 24 Chemin de Borde Rouge
City Castanet-Tolosan
ZIP/Postal code 31326
Country France
 
Platforms (1)
GPL22867 PacBio RS II (Ralstonia solanacearum)
Samples (1)
GSM2450967 RS_GMI1000_methylome
Relations
SRA SRP096275

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93317_RAW.tar 175.8 Mb (http)(custom) TAR (of CSV, GFF)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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