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Series GSE93790 Query DataSets for GSE93790
Status Public on Jun 29, 2017
Title PIWI-interacting RNAs as novel regulators of pancreatic beta-cell function [p10, adult samples]
Organism Rattus norvegicus
Experiment type Non-coding RNA profiling by array
Summary There is mounting evidence indicating that piRNAs are also present in somatic cells where they may accomplish additional regulatory tasks. The aim of this study was to identify the piRNAs expressed in pancreatic islets and to determine whether they are involved in the control of beta-cell activities. piRNA profiling of rat pancreatic islets was performed by microarray. We detected about 18’000 piRNAs in rat pancreatic islets, many of which were differentially expressed throughout islet postnatal development.
 
Overall design Total RNA from two P10 pups islets were pooled while islets from adult rats were extracted individually. 3 Adult rat islets samples and 3 p10 rats islets samples were labeled using a RNA ligase method and were hybridized onto the piRNA Array in Agilent’s SureHyb Hybridization Chambers. The arrays were scanned by the Agilent Scanner G2505C.
 
Contributor(s) Jacovetti C, Henaoui I, Regazzi R
Citation(s) 28711973
Submission date Jan 18, 2017
Last update date Sep 29, 2017
Contact name Imene Henaoui
E-mail(s) imene.henaoui@unil.ch
Phone 0041765476311
Organization name Unil-DNF
Lab Romano Regazzi
Street address Rue du Bugnon 9
City Lausanne
State/province Vaud
ZIP/Postal code 1005
Country Switzerland
 
Platforms (1)
GPL22944 Agilent-026578 Rat piRNA microarray (probe name version)
Samples (6)
GSM2462163 P10_rat islet_1
GSM2462164 P10_rat islet_2
GSM2462165 P10_rat-islet_3
This SubSeries is part of SuperSeries:
GSE93792 PIWI-interacting RNAs as novel regulators of pancreatic beta-cell function
Relations
BioProject PRJNA362362

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93790_Changes_in_piRNA_expression_between_newborn_and_adult_islets.xlsx 304.7 Kb (ftp)(http) XLSX
GSE93790_RAW.tar 11.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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