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Series GSE94050 Query DataSets for GSE94050
Status Public on Aug 06, 2017
Title Single cell analysis of sister blastomeres of 2-cell mouse embryos respecting pair associations
Organism Mus musculus
Experiment type Expression profiling by array
Summary Upon 2-cell embryo splitting, individual blastomeres were compared and contrasted with each other respecting pair associations (e.g. blastomere '1a' and '1b' of embryo 1, '2a' and '2b' of embryo 2, and so forth)
Transcriptome analysis followed by cluster analysis (Ward) was able to match a minority of the blastomeres with the correct sister blastomere
 
Overall design Pair association (e.g. blastomere 'a' and 'b' from the same 2-cell embryo) was rigorously observed
 
Contributor(s) Boiani M, Nordhoff V
Citation(s) 28811525
Submission date Jan 25, 2017
Last update date Nov 05, 2017
Contact name Michele Boiani
E-mail(s) michele.boiani@mac.com
Organization name Max Planck Institute Muenster
Street address Roentgenstrasse 20
City Muenster
ZIP/Postal code 48149
Country Germany
 
Platforms (1)
GPL20775 [MTA-1_0] Affymetrix Mouse Transcriptome Array 1.0 [transcript (gene) CSV version]
Samples (20)
GSM2467521 blastomere pair 1 (after 2-cell stage bisection)
GSM2467522 sister blastomere pair 1 (after 2-cell stage bisection)
GSM2467523 blastomere pair 2 (after 2-cell stage bisection)
Relations
BioProject PRJNA368650

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94050_RAW.tar 493.3 Mb (http)(custom) TAR (of CEL)
GSE94050_RMA_single_normalized_expression_values_060117.SST-RMA-GENE-FULL-Group1.txt.gz 21.0 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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