|
| Status |
Public on Feb 14, 2018 |
| Title |
Expression analysis of Bacillus anthracis Sterne wild-type and deltaClpX mutant strains |
| Organism |
Bacillus anthracis str. Sterne |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of whole genome expression level changes in Bacillus anthracis Sterne deltaClpX mutant compared to the wild-type strain after growth in nutrient rich media.
The deltaClpX mutant used in this study is described in McGillivray et al. 2009. ClpX Protease Contributes to Antimicrobial Peptide Resistance and Virulence Phenotypes of Bacillus anthracis. Journal of Innate Immunity 1(5): 494-506.
|
| |
|
| Overall design |
A six chip study using total RNA recovered from three separate cultures of the wild-type Bacillus anthracis Sterne strain and three separate cultures of the deltaClpX mutant strain. Each chip measures the expression level of 5287 chromosomal genes from Bacillus anthracis Sterne.
|
| |
|
| Contributor(s) |
McGillivray S |
| Citation(s) |
29473820 |
| |
| Submission date |
Feb 01, 2017 |
| Last update date |
Oct 16, 2018 |
| Contact name |
Shauna McGillivray |
| E-mail(s) |
s.mcgillivray@tcu.edu
|
| Organization name |
TCU
|
| Department |
Biology
|
| Street address |
2800 S. University Dr
|
| City |
Fort Worth |
| State/province |
TX |
| ZIP/Postal code |
76129 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL23020 |
Roche NimbleGen Bacillus anthracis Sterne 385K Gene Expression Microarray [2006-07-27_TI260799_60mer] |
|
| Samples (6)
|
| GSM2474745 |
wild-type Bacillus anthracis Sterne replicate 1 |
| GSM2474746 |
wild-type Bacillus anthracis Sterne replicate 2 |
| GSM2474747 |
wild-type Bacillus anthracis Sterne replicate 3 |
| GSM2474748 |
delta ClpX Bacillus anthracis Sterne replicate 1 |
| GSM2474749 |
delta ClpX Bacillus anthracis Sterne replicate 2 |
| GSM2474750 |
delta ClpX Bacillus anthracis Sterne replicate 3 |
|
| Relations |
| BioProject |
PRJNA369565 |
Less...
More...