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Series GSE94624 Query DataSets for GSE94624
Status Public on Mar 31, 2017
Title Colon epithelial cells gene expression data of Sphingomyelin synthase 2 knockout colitis mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Sphingomyelin synthase (SMS) 2 is the synthetic enzyme of sphingomyelin (SM), which regulates the fluidity and microdomain structure of the plasma membrane. We investigated the effect of SMS2 deficiency on dextran sodium sulfate (DSS)-induced murine colitis, and found suppression of DSS-induced inflammation in SMS2 deficient (SMS2-/-) mice. Results provide insight into the role of SMS2 in inflammation.
 
Overall design Colon epithelial cells were isolated from wild-type (WT) and SMS2 knockout mice at day 2 after initiation of DSS treatment or untreated controls. Two independent biologic replicates were performed.
Web link http://www.fasebj.org/content/early/2017/05/18/fj.201601225RR.abstract
 
Contributor(s) Hashizume C, Ohnishi T, Okazaki T
Citation(s) 28522594
Submission date Feb 07, 2017
Last update date Feb 01, 2019
Contact name Chieko Hashizume
E-mail(s) hashizume.c29@gmail.com
Phone +81 76 218 8337
Organization name Kanazawa Medical University
Department Medicine
Lab Hematology/Immunology
Street address 1-1 Daigaku
City Uchinada
State/province N/A
ZIP/Postal code 9200293
Country Japan
 
Platforms (1)
GPL23038 [Clariom_S_Mouse] Affymetrix Clariom S Assay, Mouse (Includes Pico Assay)
Samples (8)
GSM2479544 WT_untreat_biological rep1
GSM2479545 WT_untreat_biological rep2
GSM2479546 WT_DSS_biological rep1
Relations
BioProject PRJNA371626

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE94624_RAW.tar 10.2 Mb (http)(custom) TAR (of CEL, CHP)
Processed data provided as supplementary file
Processed data included within Sample table

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