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| Status |
Public on Oct 01, 2019 |
| Title |
Gene expression profiling of Antarctic krill in LD condition |
| Organism |
Euphausia superba |
| Experiment type |
Expression profiling by array
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| Summary |
This work represents the first characterization of the krill circadian transcriptome under laboratory conditions and provides a first insight into the genetic regulation of physiological changes, which occur around the clock in light-dark (LD) and in constant darkness (DD) condition.
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| Overall design |
Gene expression profiling was performed with the ‘‘Krill 2.0’’ custom platform (Agilent) in specimens collected at regular intervals throughout the 24 hours cycle (external times: 06:00, 09:00, 12:00, 15:00, 18:00, 21:00, 24:00, 03:00 and 06:00) in light-dark (LD) condition.
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| Contributor(s) |
Biscontin A, Martini P, Meyer B, Costa R, Teschke M, De Pitta C |
| Citation(s) |
31554872 |
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| Submission date |
Feb 10, 2017 |
| Last update date |
Oct 03, 2019 |
| Contact name |
Cristiano De Pitta |
| E-mail(s) |
cristiano.depitta@unipd.it
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| Phone |
+390498276210
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| Organization name |
University of Padova
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| Department |
Biology
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| Street address |
Via U. Bassi, 58/B
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| City |
Padova |
| ZIP/Postal code |
35131 |
| Country |
Italy |
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| Platforms (1) |
| GPL23052 |
Agilent-049690 Krill 2.0 [Probe Name] |
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| Samples (27)
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| GSM2482197 |
krill fished at 06:00, LD, biological replicate 1 (LD06-A1) |
| GSM2482198 |
krill fished at 06:00, LD, biological replicate 2 (LD06-B1) |
| GSM2482199 |
krill fished at 06:00, LD, biological replicate 3 (LD06-C1) |
| GSM2482200 |
krill fished at 09:00, LD, biological replicate 1 (LD09-A) |
| GSM2482201 |
krill fished at 09:00, LD, biological replicate 2 (LD09-B) |
| GSM2482202 |
krill fished at 09:00, LD, biological replicate 3 (LD09-C) |
| GSM2482203 |
krill fished at 12:00, LD, biological replicate 1 (LD12-A) |
| GSM2482204 |
krill fished at 12:00, LD, biological replicate 2 (LD12-B) |
| GSM2482205 |
krill fished at 12:00, LD, biological replicate 3 (LD12-C) |
| GSM2482206 |
krill fished at 15:00, LD, biological replicate 1 (LD15-A) |
| GSM2482207 |
krill fished at 15:00, LD, biological replicate 2 (LD15-B) |
| GSM2482208 |
krill fished at 15:00, LD, biological replicate 3 (LD15-C) |
| GSM2482209 |
krill fished at 18:00, LD, biological replicate 1 (LD18-A) |
| GSM2482210 |
krill fished at 18:00, LD, biological replicate 2 (LD18-B) |
| GSM2482211 |
krill fished at 18:00, LD, biological replicate 3 (LD18-C) |
| GSM2482212 |
krill fished at 21:00, LD, biological replicate 1 (LD21-A) |
| GSM2482213 |
krill fished at 21:00, LD, biological replicate 2 (LD21-B) |
| GSM2482214 |
krill fished at 21:00, LD, biological replicate 3 (LD21-C) |
| GSM2482215 |
krill fished at 24:00, LD, biological replicate 1 (LD24-A) |
| GSM2482216 |
krill fished at 24:00, LD, biological replicate 2 (LD24-B) |
| GSM2482217 |
krill fished at 24:00, LD, biological replicate 3 (LD24-C) |
| GSM2482218 |
krill fished at 03:00, LD, biological replicate 1 (LD03-A) |
| GSM2482219 |
krill fished at 03:00, LD, biological replicate 2 (LD03-B) |
| GSM2482220 |
krill fished at 03:00, LD, biological replicate 3 (LD03-C) |
| GSM2482221 |
krill fished at 06:00, LD, biological replicate 1 (LD06-A2) |
| GSM2482222 |
krill fished at 06:00, LD, biological replicate 2 (LD06-B2) |
| GSM2482223 |
krill fished at 06:00, LD, biological replicate 3 (LD06-C2) |
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| This SubSeries is part of SuperSeries: |
| GSE94757 |
Analysis of the circadian transcriptome of the Antarctic krill Euphausia superba |
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| Relations |
| BioProject |
PRJNA373976 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE94756_RAW.tar |
219.3 Mb |
(http)(custom) |
TAR (of TXT) |
| Processed data included within Sample table |
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