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| Status |
Public on May 21, 2017 |
| Title |
Differentially expressed genes in developing seeds of Arabidopsis thaliana accessions Col-0 and C24 |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
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| Summary |
In order to identify differentially expressed genes in developing seeds of Arabidopsis thaliana three different stages of seed development were analysed (9-10, 10-11 and 12-13 days after flower opening) for two Arabidopsis thaliana accessions, Col-0 and C24. For each stage and accession three biological replicates were analysed.
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| Overall design |
Expression data for the two accessions were compared for developing seeds of the same stage. For each of the accessions gene expression at the different developmental stages was also compared.
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| Contributor(s) |
Schmidt R, Boudichevskaia A |
| Citation(s) |
28534065 |
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| Submission date |
Feb 10, 2017 |
| Last update date |
Aug 21, 2017 |
| Contact name |
Renate Hanna Schmidt |
| E-mail(s) |
schmidtr@ipk-gatersleben.de
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| Phone |
+49 39482 5591
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| Organization name |
Leibniz Institute of Plant Genetics and Crop Plant Research (IPK)
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| Department |
Breeding Research
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| Lab |
Genome Plasticity
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| Street address |
Corrensstrasse 3
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| City |
Stadt Seeland |
| State/province |
Sachsen-Anhalt |
| ZIP/Postal code |
06466 |
| Country |
Germany |
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| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
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| Samples (18)
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| GSM2482317 |
Col-0 developing seeds, 8-9 days after flower opening, biological replicate 1 |
| GSM2482318 |
Col-0 developing seeds, 8-9 days after flower opening, biological replicate 2 |
| GSM2482319 |
Col-0 developing seeds, 8-9 days after flower opening, biological replicate 3 |
| GSM2482320 |
Col-0 developing seeds, 10-11 days after flower opening, biological replicate 1 |
| GSM2482321 |
Col-0 developing seeds, 10-11 days after flower opening, biological replicate 2 |
| GSM2482322 |
Col-0 developing seeds, 10-11 days after flower opening, biological replicate 3 |
| GSM2482323 |
Col-0 developing seeds, 12-13 days after flower opening, biological replicate 1 |
| GSM2482324 |
Col-0 developing seeds, 12-13 days after flower opening, biological replicate 2 |
| GSM2482325 |
Col-0 developing seeds, 12-13 days after flower opening, biological replicate 3 |
| GSM2482326 |
C24 developing seeds, 8-9 days after flower opening, biological replicate 1 |
| GSM2482327 |
C24 developing seeds, 8-9 days after flower opening, biological replicate 2 |
| GSM2482328 |
C24 developing seeds, 8-9 days after flower opening, biological replicate 3 |
| GSM2482329 |
C24 developing seeds, 10-11 days after flower opening, biological replicate 1 |
| GSM2482330 |
C24 developing seeds, 10-11 days after flower opening, biological replicate 2 |
| GSM2482331 |
C24 developing seeds, 10-11 days after flower opening, biological replicate 3 |
| GSM2482332 |
C24 developing seeds, 12-13 days after flower opening, biological replicate 1 |
| GSM2482333 |
C24 developing seeds, 12-13 days after flower opening, biological replicate 2 |
| GSM2482334 |
C24 developing seeds, 12-13 days after flower opening, biological replicate 3 |
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| This SubSeries is part of SuperSeries: |
| GSE94764 |
Differentially expressed genes in developing seeds of Arabidopsis thaliana accessions Col-0 and C24 - Impact of polymorphic probes on the detection of differentially expressed genes |
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| Relations |
| BioProject |
PRJNA373989 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE94762_RAW.tar |
59.4 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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