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| Status |
Public on Mar 28, 2017 |
| Title |
Histone acetyltransferase OsGCN5 palys an important role in establishing programs of cell proliferation of crown root meristem |
| Organism |
Oryza sativa Japonica Group |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Shoot-borne crown roots are the major root system in cereals. Previous work has shown that the Wuschel-related homeobox gene WOX11 is necessary and sufficient to promote rice crown root emergence and elongation. Here, we show that WOX11 recruits the ADA2-GCN5 histone acetyltransferase (HAT) module to activate downstream target genes in crown root meristem. OsGCN5 and OsADA2 are highly expressed in root meristem. Knockdown of OsGCN5 and OsADA2 affects crown root initiation and elongation. Here we sought to find the downstream genes of OsGCN5 in rice crown root tip.
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| |
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| Overall design |
Genome-wide analysis of root transcriptome of OsGCN5 RNAi and corresponding wild type.
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| |
|
| Contributor(s) |
Zhou S, Zhou DX |
| Citation(s) |
28487409 |
| |
| Submission date |
Feb 28, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
shaoli zhou |
| E-mail(s) |
zhoushaoli@mail.hzau.edu.cn
|
| Organization name |
Huazhong Agricultural University
|
| Department |
National Key Laboratory of Crop Genetic Improvement
|
| Street address |
shizishan street
|
| City |
Wuhan |
| State/province |
Hubei |
| ZIP/Postal code |
430070 |
| Country |
China |
| |
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| Platforms (1) |
| GPL22250 |
Illumina HiSeq 3000 (Oryza sativa Japonica Group) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA377253 |
| SRA |
SRP100838 |
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