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Series GSE96073 Query DataSets for GSE96073
Status Public on Jun 29, 2017
Title Yellow-Leaf 1 encodes a magnesium-protoporphyrin IX monomethyl ester cyclase, involved in chlorophyll biosynthesis in rice (Oryza sativa L.)
Organism Oryza sativa
Experiment type Expression profiling by high throughput sequencing
Summary We performed a transcriptomics analysis in the wild type and the mutant, and the expression levels of photosynthesis and chloroplast development genes were affected in yl-1 mutant.
 
Overall design RNA-sequencing analysis was performed on an Illumina Hiseq 4000 (LC Sciences, USA) following the vendor's recommended protocol
 
Contributor(s) Sheng Z, Lv Y
Citation(s) 28558018
Submission date Mar 10, 2017
Last update date May 15, 2019
Contact name lv yu song
Organization name CNRRI
Street address CNRRI
City Hangzhou
ZIP/Postal code 311400
Country China
 
Platforms (1)
GPL23013 Illumina HiSeq 4000 (Oryza sativa)
Samples (2)
GSM2532795 wild-type
GSM2532796 Yellow-Leaf 1
Relations
BioProject PRJNA378761
SRA SRP101717

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96073_Genes.fpkm_expression.xlsx 1.2 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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