NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE96965 Query DataSets for GSE96965
Status Public on Jun 28, 2017
Title Identification and mode of action of a plant natural product targeting human fungal pathogens
Organism Candida albicans
Experiment type Expression profiling by high throughput sequencing
Summary Candida albicans was subjected to treatment with tomatidine and samples were taken at 2 different time points (1h, 3h). The results show that tomatidine induces genes involved in ergosterol biosynthesis as compared to untreated controls.
 
Overall design C. albicans SC5314 strain was exposed to 250 µM tomatidine and total RNA was extracted after 1 h or 3 h tomatidine/solvent exposure.
 
Contributor(s) Dorsaz S, Sanglard D
Citation(s) 28674054
Submission date Mar 23, 2017
Last update date May 15, 2019
Contact name Dominique Sanglard
E-mail(s) Dominique.Sanglard@chuv.ch
URL http://www.chuv.ch/imul
Organization name University of Lausanne and University Hospital Center
Street address Rue Bugnon 48
City Lausanne
ZIP/Postal code 1011
Country Switzerland
 
Platforms (1)
GPL19036 Illumina HiSeq 2500 (Candida albicans)
Samples (12)
GSM2546896 T1_nt_r1
GSM2546897 T1_nt_r2
GSM2546898 T1_nt_r3
Relations
BioProject PRJNA380235
SRA SRP102364

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE96965_1hour_tomatidine_treatment.xlsx 435.4 Kb (ftp)(http) XLSX
GSE96965_3hours_tomatidine_treatment.xlsx 103.7 Kb (ftp)(http) XLSX
GSE96965_TotalexonCounts_SD.xlsx 651.4 Kb (ftp)(http) XLSX
GSE96965_voom_normalized_gene_expression.xlsx 786.1 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap