NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE97515 Query DataSets for GSE97515
Status Public on Apr 08, 2017
Title Exposure of bovine oocytes to elevated insulin concentration (10 ug/ml) during in vitro maturation changes DNA methylation pattern in Day-8-blastocysts – an epigenetic study.
Organism Bos taurus
Experiment type Methylation profiling by genome tiling array
Summary The aim was to study the potential effect of hyperinsulinemia on gene expression and differential DNA-methylation of cow embryos by adding 10 µg/ml (INS10) during in vitro oocyte maturation.
 
Overall design In total, 882 abattoir-derived oocytes (equally distributed between both treatments (INS10) and a control, (INS0)) produced 199 embryos in a period of 8 weeks. Cleavage blastocyst rates were recorded and embryos evaluated for stage and quality grade before individually frozen at -80 °C. 120 of the embryos were used for the methylome analysis, pooled in groups of 10 embryos with a similar distribution of embryos (pools adjusted for quality grade and developmental stage in order to avoid confounding effects in the results due to different embryo characteristics). The experiment was run in four replicates per treatment group.
 
Contributor(s) Laskowski D, Humblot P, Sirard M, Sjunnesson Y, Båge R, Andersson G
Citation(s) 29745447
Submission date Apr 07, 2017
Last update date Nov 12, 2018
Contact name Marc-André Sirard
E-mail(s) Marc-Andre.Sirard@fsaa.ulaval.ca
Organization name Université Laval
Department Sciences Animales
Street address Offfice 2732, 2440 Hochelaga Blvd.
City Québec City
State/province Quebec
ZIP/Postal code G1V 0A6
Country Canada
 
Platforms (1)
GPL18384 EmbryoGENE DNA Methylation Array Bovine 2x400K v2.0
Samples (4)
GSM2570526 High_Insulin_1
GSM2570527 High_Insulin_2
GSM2570528 High_Insulin_3
This SubSeries is part of SuperSeries:
GSE97517 Exposure of bovine oocytes to insulin concentration (0.1 and 10 ug/ml) during in vitro maturation changes DNA methylation pattern in Day-8-blastocysts - an epigenetic study
Relations
BioProject PRJNA382157

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97515_RAW.tar 94.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap