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Series GSE98232 Query DataSets for GSE98232
Status Public on Jul 12, 2017
Title Analysis of gene expression in the distal forelimbs in 2.4Mb inversion adjacent to the HoxD cluster
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary E12.5 mouse distal forelimb embryonic transcriptome
 
Overall design Data from inversion to compare with WT
RNA-Seq polyA on transcripts extracted from the dissection of three pairs of embryonic forelimbs at E12.5
 
Contributor(s) Fabre PJ
Citation(s) 28784160
Submission date Apr 26, 2017
Last update date Jul 25, 2021
Contact name Pierre J Fabre
E-mail(s) fabre.pierre@gmail.com
Organization name EPFL
Department ISREC
Lab Laboratory of Developmental Genomics
Street address Station 19
City Lausanne
ZIP/Postal code CH-1015
Country Switzerland
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (2)
GSM2589627 invDFL
GSM2589628 wtFL
This SubSeries is part of SuperSeries:
GSE98233 Large-scale genomic reorganizations of topological domains (TADs) at the HoxD locus
Relations
BioProject PRJNA384355
SRA SRP105267

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE98232_RAW.tar 191.7 Mb (http)(custom) TAR (of BW)
GSE98232_transcripts_differential_wtDFL-invDFL.txt.gz 1.1 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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