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GEO accession:
Series GSE99130
Query DataSets for GSE99130
Status
Public on Aug 10, 2017
Title
Brain RNA-seq one day after knockdown of the corazonin receptor in Harpegnathos ants
Organism
Harpegnathos saltator
Experiment type
Expression profiling by high throughput sequencing
Summary
This experiment aimed at determining the immediate (d1) transcriptional consequences of knockding down the corazonin receptor in the ant brain.
Overall design
Dueling Harpegnathos individuals were removed from the transition colony and injected with corazonin receptor or GFP siRNAs to perform mRNA knockdown
Contributor(s)
Bonasio R
,
Gospocic J
,
Shields E
Citation(s)
28802044
Submission date
May 22, 2017
Last update date
Feb 04, 2022
Contact name
Roberto Bonasio
Organization name
University of Pennsylvania
Department
Cell and Developmental Biology
Lab
Bonasio
Street address
3400 Civic Center Blvd - SCTR 9-111
City
Philadelphia
State/province
PA
ZIP/Postal code
19104
Country
USA
Platforms (1)
GPL22089
Illumina NextSeq 500 (Harpegnathos saltator)
Samples (36)
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GSM2633854
Corazonin receptor KD - rep1 (t1)
GSM2633855
Corazonin receptor KD - rep1 (t2)
GSM2633856
Corazonin receptor KD - rep2 (t1)
GSM2633857
Corazonin receptor KD - rep2 (t2)
GSM2633858
Corazonin receptor KD - rep3 (t1)
GSM2633859
Corazonin receptor KD - rep3 (t2)
GSM2633860
Corazonin receptor KD - rep4 (t1)
GSM2633861
Corazonin receptor KD - rep4 (t2)
GSM2633862
Corazonin receptor KD - rep5 (t1)
GSM2633863
Corazonin receptor KD - rep5 (t2)
GSM2633864
Corazonin receptor KD - rep6 (t1)
GSM2633865
Corazonin receptor KD - rep6 (t2)
GSM2633866
Corazonin receptor KD - rep7 (t1)
GSM2633867
Corazonin receptor KD - rep7 (t2)
GSM2633868
Corazonin receptor KD - rep8 (t1)
GSM2633869
Corazonin receptor KD - rep8 (t2)
GSM2633870
Corazonin receptor KD - rep9 (t1)
GSM2633871
Corazonin receptor KD - rep9 (t2)
GSM2633872
GFP KD control - rep1 (t1)
GSM2633873
GFP KD control - rep1 (t2)
GSM2633874
GFP KD control - rep2 (t1)
GSM2633875
GFP KD control - rep2 (t2)
GSM2633876
GFP KD control - rep3 (t1)
GSM2633877
GFP KD control - rep3 (t2)
GSM2633878
GFP KD control - rep4 (t1)
GSM2633879
GFP KD control - rep4 (t2)
GSM2633880
GFP KD control - rep5 (t1)
GSM2633881
GFP KD control - rep5 (t2)
GSM2633882
GFP KD control - rep6 (t1)
GSM2633883
GFP KD control - rep6 (t2)
GSM2633884
GFP KD control - rep7 (t1)
GSM2633885
GFP KD control - rep7 (t2)
GSM2633886
GFP KD control - rep8 (t1)
GSM2633887
GFP KD control - rep8 (t2)
GSM2633888
GFP KD control - rep9 (t1)
GSM2633889
GFP KD control - rep9 (t2)
This SubSeries is part of SuperSeries:
GSE83807
Caste-specific gene expression in ants
Relations
BioProject
PRJNA387394
SRA
SRP107741
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
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Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE99130_Hsal.CrzR.KD.DESeq2.txt.gz
519.7 Kb
(ftp)
(http)
TXT
GSE99130_Hsal.CrzR.KD.RPKMs.txt.gz
2.4 Mb
(ftp)
(http)
TXT
SRA Run Selector
Raw data are available in SRA
Processed data are available on Series record
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