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Series GSE99154 Query DataSets for GSE99154
Status Public on Aug 01, 2019
Title H3K36me3 protects the mouse epigenome from single nucleotide variations [ChIP-Seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We analyze high-throughput profiling of histone H3K36me3 in mouse embryonic stem cells from chromatin immunoprecipitated DNA captured by H3K36me3-specific antibody. We find that H3K36me3 distribution is like expected and enriched at transcribing gene bodies especially with enrichment at 3’-terminal of gene body, which is identical with findings observed in other mammalian cells.
 
Overall design Examination of histone H3K36me3 modification in mouse embryonic stem cell with histone H3.1WT overexpression, we analyzed two replicates.
 
Contributor(s) Sun F, Kang X, Chang J
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Submission date May 22, 2017
Last update date Aug 01, 2019
Contact name Jin Sun
E-mail(s) sunjin@tongji.edu.cn
Organization name Tongji University
Department life science and technology
Lab Jiang
Street address siping1239
City shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (4)
GSM2634288 H3.1WT input rep1
GSM2634289 H3.1WT input rep2
GSM2634290 H3.1WT H3K36me3 rep1
This SubSeries is part of SuperSeries:
GSE99156 H3K36me3 protects the mouse epigenome from single nucleotide variations
Relations
BioProject PRJNA387442
SRA SRP107767

Download family Format
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99154_H3K36me3.bw 707.4 Mb (ftp)(http) BW
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Raw data are available in SRA
Processed data are available on Series record

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