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GEO accession:
Series GSE99311
Query DataSets for GSE99311
Status
Public on Jul 31, 2017
Title
Enhancer reprogramming promotes pancreatic cancer progression and metastasis
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
28757253
Submission date
May 25, 2017
Last update date
Jul 25, 2021
Contact name
Jae Seok Roe
E-mail(s)
jroe@yonsei.ac.kr
Organization name
Yonsei University
Street address
Yonsei-ro, 50
City
Seoul
ZIP/Postal code
03722
Country
South Korea
Platforms (2)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (136)
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More...
GSM2640269
N5 ATAC-Seq
GSM2640270
N6 ATAC-Seq
GSM2640271
P2 ATAC-Seq
GSM2640272
P3 ATAC-Seq
GSM2640273
T3 ATAC-Seq
GSM2640274
T6 ATAC-Seq
GSM2640275
T23 ATAC-Seq
GSM2640276
M1L ATAC-Seq
GSM2640277
M3P ATAC-Seq
GSM2640278
M10P ATAC-Seq
GSM2640354
N5 H3K27ac ChIP-Seq
GSM2640355
N6 H3K27ac ChIP-Seq
GSM2640356
P2 H3K27ac ChIP-Seq
GSM2640357
P3 H3K27ac ChIP-Seq
GSM2640358
T3 H3K27ac ChIP-Seq
GSM2640359
T6 H3K27ac ChIP-Seq
GSM2640360
T19 H3K27ac ChIP-Seq
GSM2640361
T23 H3K27ac ChIP-Seq
GSM2640362
T33 H3K27ac ChIP-Seq
GSM2640363
T34 H3K27ac ChIP-Seq
GSM2640364
M1L H3K27ac ChIP-Seq
GSM2640365
M3L H3K27ac ChIP-Seq
GSM2640366
M3P H3K27ac ChIP-Seq
GSM2640367
M6P H3K27ac ChIP-Seq
GSM2640368
M10P H3K27ac ChIP-Seq
GSM2640369
M15D H3K27ac ChIP-Seq
GSM2640370
T3 H3K4me1 ChIP-Seq
GSM2640371
T6 H3K4me1 ChIP-Seq
GSM2640372
T23 H3K4me1 ChIP-Seq
GSM2640373
M1L H3K4me1 ChIP-Seq
GSM2640374
M3P H3K4me1 ChIP-Seq
GSM2640375
M10P H3K4me1 ChIP-Seq
GSM2640376
T3 FOXA1 ChIP-Seq
GSM2640377
T6 FOXA1 ChIP-Seq
GSM2640378
T23 FOXA1 ChIP-Seq
GSM2640379
M1L FOXA1 ChIP-Seq
GSM2640380
M3P FOXA1 ChIP-Seq
GSM2640381
M10P FOXA1 ChIP-Seq
GSM2640382
N5 Ipt ChIP-Seq
GSM2640383
N6 Ipt ChIP-Seq
GSM2640384
P2 Ipt ChIP-Seq
GSM2640385
P3 Ipt ChIP-Seq
GSM2640386
T3 Ipt ChIP-Seq
GSM2640387
T6 Ipt ChIP-Seq
GSM2640388
T19 Ipt ChIP-Seq
GSM2640389
T23 Ipt ChIP-Seq
GSM2640390
T33 Ipt ChIP-Seq
GSM2640391
T34 Ipt ChIP-Seq
GSM2640392
M1L Ipt ChIP-Seq
GSM2640393
M3L Ipt ChIP-Seq
GSM2640394
M3P Ipt ChIP-Seq
GSM2640395
M6P Ipt ChIP-Seq
GSM2640396
M10P Ipt ChIP-Seq
GSM2640397
M15D Ipt ChIP-Seq
GSM2640398
T6/sgRosa H3K27ac ChIP-Seq
GSM2640399
T6/sgp53 H3K27ac ChIP-Seq
GSM2640400
T6/sgRosa Ipt ChIP-Seq
GSM2640401
T6/sgp53 Ipt ChIP-Seq
GSM2640402
hT1 H3K27ac ChIP-Seq
GSM2640403
hT3 H3K27ac ChIP-Seq
GSM2640404
hT1 Ipt ChIP-Seq
GSM2640405
hT3 Ipt ChIP-Seq
GSM2640406
KPC-2D/emp H3K27ac ChIP-Seq (rep1)
GSM2640407
KPC-2D/emp H3K27ac ChIP-Seq (rep2)
GSM2640408
KPC-2D/FOXA1 H3K27ac ChIP-Seq (rep1)
GSM2640409
KPC-2D/FOXA1 H3K27ac ChIP-Seq (rep2)
GSM2640410
KPC-2D/emp FOXA1 ChIP-Seq (rep1)
GSM2640411
KPC-2D/emp FOXA1 ChIP-Seq (rep2)
GSM2640412
KPC-2D/FOXA1 FOXA1 ChIP-Seq (rep1)
GSM2640413
KPC-2D/FOXA1 FOXA1 ChIP-Seq (rep2)
GSM2640414
KPC-2D/emp Ipt ChIP-Seq
GSM2640415
KPC-2D/FOXA1 Ipt ChIP-Seq
GSM2640416
hT2-2D/emp H3K27ac ChIP-Seq
GSM2640417
hT2-2D/FOXA1 H3K27ac ChIP-Seq
GSM2640418
hT2-2D/emp Ipt ChIP-Seq
GSM2640419
hT2-2D/FOXA1 Ipt ChIP-Seq
GSM2640420
T3/emp H3K27ac ChIP-Seq
GSM2640421
T23/emp H3K27ac ChIP-Seq
GSM2640422
T3/FOXA1 H3K27ac ChIP-Seq
GSM2640423
T23/FOXA1 H3K27ac ChIP-Seq
GSM2640424
T3/GATA5 H3K27ac ChIP-Seq
GSM2640425
T23/GATA5 H3K27ac ChIP-Seq
GSM2640426
T3/FOXA1-GATA5 H3K27ac ChIP-Seq
GSM2640427
T23/FOXA1-GATA5 H3K27ac ChIP-Seq
GSM2640428
T3/emp Ipt ChIP-Seq
GSM2640429
T23/emp Ipt ChIP-Seq
GSM2640430
T3/FOXA1 Ipt ChIP-Seq
GSM2640431
T23/FOXA1 Ipt ChIP-Seq
GSM2640432
T3/GATA5 Ipt ChIP-Seq
GSM2640433
T23/GATA5 Ipt ChIP-Seq
GSM2640434
T3/FOXA1-GATA5 Ipt ChIP-Seq
GSM2640435
T23/FOXA1-GATA5 Ipt ChIP-Seq
GSM2640436
M1L/shRen H3K27ac ChIP-Seq (rep1)
GSM2640437
M1L/shRen H3K27ac ChIP-Seq (rep2)
GSM2640438
M1L/shFoxa1 H3K27ac ChIP-Seq (rep1)
GSM2640439
M1L/shFoxa1 H3K27ac ChIP-Seq (rep2)
GSM2640440
M1L/shRen FOXA1 ChIP-Seq
GSM2640441
M1L/shFoxa1 FOXA1 ChIP-Seq
GSM2640442
M1L/shRen Ipt ChIP-Seq
GSM2640443
M1L/shFoxa1 Ipt ChIP-Seq
GSM2640979
N5 RNA-Seq
GSM2640980
N6 RNA-Seq
GSM2640981
P2 RNA-Seq
GSM2640982
P3 RNA-Seq
GSM2640983
T3 RNA-Seq
GSM2640984
T6 RNA-Seq
GSM2640985
T19 RNA-Seq
GSM2640986
T23 RNA-Seq
GSM2640987
T33 RNA-Seq
GSM2640988
T34 RNA-Seq
GSM2640989
M1L RNA-Seq
GSM2640990
M3L RNA-Seq
GSM2640991
M3P RNA-Seq
GSM2640992
M6P RNA-Seq
GSM2640993
M10P RNA-Seq
GSM2640994
M15D RNA-Seq
GSM2640995
KPC-2D/emp RNA-Seq (rep1)
GSM2640996
KPC-2D/emp RNA-Seq (rep2)
GSM2640997
KPC-2D/FOXA1 RNA-Seq (rep1)
GSM2640998
KPC-2D/FOXA1 RNA-Seq (rep2)
GSM2640999
hT2-2D/emp RNA-Seq (rep1)
GSM2641000
hT2-2D/emp RNA-Seq (rep2)
GSM2641001
hT2-2D/FOXA1 RNA-Seq (rep1)
GSM2641002
hT2-2D/FOXA1 RNA-Seq (rep2)
GSM2641003
T3/emp RNA-Seq
GSM2641004
T23/emp RNA-Seq
GSM2641005
T3/FOXA1 RNA-Seq
GSM2641006
T23/FOXA1 RNA-Seq
GSM2641007
T3/GATA5 RNA-Seq
GSM2641008
T23/GATA5 RNA-Seq
GSM2641009
T3/FOXA1-GATA5 RNA-Seq
GSM2641010
T23/FOXA1-GATA5 RNA-Seq
GSM2641011
M1L/shRen RNA-Seq
GSM2641012
M1L/shFoxa1 RNA-Seq
GSM2641013
M1L/sgRosa RNA-Seq
GSM2641014
M1L/sgFoxa1 RNA-Seq
This SuperSeries is composed of the following SubSeries:
GSE99275
Enhancer reprogramming promotes pancreatic cancer progression and metastasis [ATAC-seq]
GSE99284
Enhancer reprogramming promotes pancreatic cancer progression and metastasis [ChIP-seq]
GSE99310
Enhancer reprogramming promotes pancreatic cancer progression and metastasis [RNA-seq]
Relations
BioProject
PRJNA388090
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE99311_RAW.tar
15.8 Gb
(http)
(custom)
TAR (of BIGWIG, TXT)
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