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Series GSE99799 Query DataSets for GSE99799
Status Public on Jun 09, 2017
Title Aedes aegypti response to bloodfeeding and bacterial ingestion in midgut tissues of females from two strains
Organism Aedes aegypti
Experiment type Expression profiling by array
Summary Rockefeller and Singapore strain Aedes aegypti female mosquitoes differ in the number of bacteria present in the midgut. Females from each strain were either maintained on 3% sucrose solution, fed a sterile blood meal, or fed a blood meal containing a cocktail of bacteria. Differential transcript abundance was compared between females from each strain/treatment combination and a common reference sample pool. The overall goal was to determine how gene expression in Rockefeller females differs from Singapore females in order to better understand why the gut microbiome differs between the strains.
 
Overall design 15 midguts collected per sample, 3 replicate samples per treatment. Treatments: Rockefeller Sucrose fed vs. Reference, Rockefeller blood fed vs. Reference, Rockefeller blood + bacteria fed vs. Reference, Singapore Sucrose fed vs. Reference, Singapore blood fed vs. Reference, Singapore blood + bacteria fed vs. Reference.
 
Contributor(s) Short SM, Mongodin EF, MacLeod HJ, Talyuli OC, Dimopoulos G
Citation(s) 28753661
Submission date Jun 08, 2017
Last update date Jul 25, 2021
Contact name George Dimopoulos
E-mail(s) gdimopo1@jhu.edu
Organization name Johns Hopkins School of Public Health
Department Molecular Microbiology and Immunology
Lab Dimopoulos Group
Street address 615 N Wolfe St.
City Baltimore
State/province MD
ZIP/Postal code 21205
Country USA
 
Platforms (1)
GPL20714 Agilent-034627 AE2011SS Aedes aegypti array
Samples (18)
GSM2652606 Singapore blood + bacteria fed replicate 1
GSM2652607 Singapore blood fed replicate 1
GSM2652608 Singapore sucrose fed replicate 1
Relations
BioProject PRJNA389663

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE99799_RAW.tar 250.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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