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Sample GSM1006804 Query DataSets for GSM1006804
Status Public on Oct 27, 2012
Title Motor neurons-wt-rep3
Sample type RNA
 
Source name cervical motor neurons, wt
Organism Mus musculus
Characteristics tissue: cervical motor neurons
developmental stage: e12.5
strain: mix of c57/bl6, balbc, fvb
genotype/variation: wild type
Treatment protocol FACS sorting from HB9::GFP embryos
Extracted molecule total RNA
Extraction protocol Papain/Dnase dissociation
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description FACS sorted cells
Data processing quantile normalized using BSGX Version 1.0.6
 
Submission date Sep 19, 2012
Last update date Oct 27, 2012
Contact name Polyxeni Philippidou
E-mail(s) polyxeni.philippidou@nyumc.org
Organization name NYU Medical Center
Street address 550 1st ave
City New York
ZIP/Postal code 10016
Country USA
 
Platform ID GPL6887
Series (1)
GSE41013 Gene expression changes in cervical motor neurons of Hoxa5fl/fl::olig2CREHoxc5-/- mice

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2417611 93.05959 0.5619658
ILMN_2762289 91.89175 0.642094
ILMN_2896528 7096.327 0
ILMN_2721178 1828.386 0
ILMN_2458837 91.6422 0.6623932
ILMN_3033922 1042.972 0
ILMN_3092673 4603.504 0
ILMN_1230777 3143.677 0
ILMN_1246069 2469.121 0
ILMN_1232042 98.37804 0.2724359
ILMN_1243193 290.8878 0
ILMN_2524361 100.7184 0.1976496
ILMN_1242440 99.28634 0.2446581
ILMN_1233188 115.4868 0.01602564
ILMN_2543688 207.506 0
ILMN_1259789 103.4033 0.1314103
ILMN_2816356 109.9276 0.04059829
ILMN_1224596 116.9878 0.01175214
ILMN_1233643 100.3208 0.2115385
ILMN_2808939 748.2492 0

Total number of rows: 45281

Table truncated, full table size 1308 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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