|
| Status |
Public on Nov 17, 2012 |
| Title |
time: APRIL - rep3 |
| Sample type |
RNA |
| |
|
| Source name |
axillary inflorescence bud (time: APRIL)
|
| Organism |
Vitis vinifera |
| Characteristics |
time: April
tissue: axillary inflorescence bud
cultivar: Tempranillo
|
| Growth protocol |
Growth Description: No irrigation
|
| Extracted molecule |
total RNA |
| Extraction protocol |
total RNA isolation followed by RNeasy purification
|
| Label |
biotin
|
| Label protocol |
CNB Grapegen Affymetrix labeling
|
| |
|
| Hybridization protocol |
CNB Grapegen Affymetrix hybridization
|
| Scan protocol |
CNB Grapegen Affymetrix scanning
|
| Description |
germplasm name: Tempranillo cv.
organism part: axillary inflorescence bud ('PO:0004711')
development stage: 2E-L, UD:0000011 3E-L
age: >10 years
growth media: field soil
time=APRIL rep 1 (May still include original submitter created erros/discrepancies)
|
| Data processing |
RMA normalization was performed for Affymetrix Platforms: Using APT (apt-1.12.0: apt-probeset-summarize.cpp,v 1.178).
|
| |
|
| Submission date |
Nov 16, 2012 |
| Last update date |
Nov 17, 2012 |
| Contact name |
PLEXdb Curator, Sudhansu Dash |
| Organization name |
Iowa State University
|
| Department |
Virtual Reality Application Center
|
| Lab |
PLEXdb
|
| Street address |
1023 Crop Genomes Informatics Lab (Iowa State University)
|
| City |
Ames |
| State/province |
IA |
| ZIP/Postal code |
50011 |
| Country |
USA |
| |
|
| Platform ID |
GPL11004 |
| Series (1) |
| GSE42345 |
Time course of grapevine bud development |
|
