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Sample GSM1047469 Query DataSets for GSM1047469
Status Public on Dec 10, 2015
Title Pilocytic astrocytoma [PA2 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour PA2
Organism Homo sapiens
Characteristics tissue: Pilocytic astrocytoma
grade: I
Sex: M
age: 12
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
PA2.Detection Pval

Data table
ID_REF VALUE PA2.Detection Pval
ILMN_3167304 447.7353 0.6509917
ILMN_3168038 1442.495 7.12E-10
ILMN_3167890 39777.68 3.68E-38
ILMN_3167526 443.3962 0.6613303
ILMN_3167209 382.8272 0.7905408
ILMN_3168219 809.4923 0.0253219
ILMN_3167464 678.4575 0.1343643
ILMN_3167213 416.4079 0.7226908
ILMN_3167057 514.4593 0.4824289
ILMN_3168313 542.2073 0.411482
ILMN_3166972 608.8433 0.2561622
ILMN_3168149 2143.976 1.60E-26
ILMN_3168527 436.7437 0.6769453
ILMN_3167562 400.8513 0.7554019
ILMN_3168099 3221.572 3.68E-38
ILMN_3168017 1780.402 8.61E-17
ILMN_3167545 434.0865 0.6830981
ILMN_3167951 1002.509 0.000676965
ILMN_3167172 489.5403 0.5466889
ILMN_3167994 1072.484 0.000127409

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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