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Sample GSM1047476 Query DataSets for GSM1047476
Status Public on Dec 10, 2015
Title Pilocytic astrocytoma [PA9 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour PA9
Organism Homo sapiens
Characteristics tissue: Pilocytic astrocytoma
grade: I
Sex: F
age: 2
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
PA9.Detection Pval

Data table
ID_REF VALUE PA9.Detection Pval
ILMN_3167304 379.2902 0.7245646
ILMN_3168038 962.7017 0.004953632
ILMN_3167890 32744.17 3.68E-38
ILMN_3167526 461.9458 0.5582607
ILMN_3167209 706.5737 0.1180191
ILMN_3168219 547.3388 0.3751543
ILMN_3167464 1008.302 0.002347522
ILMN_3167213 401.4314 0.6829419
ILMN_3167057 1419.108 2.06E-07
ILMN_3168313 393.0335 0.6990433
ILMN_3166972 417.0172 0.6521411
ILMN_3168149 1528.801 7.58E-09
ILMN_3168527 359.3134 0.7596539
ILMN_3167562 377.305 0.7281612
ILMN_3168099 2316.952 1.28E-23
ILMN_3168017 1464.775 5.44E-08
ILMN_3167545 376.8111 0.7290523
ILMN_3167951 650.8123 0.1890402
ILMN_3167172 427.2984 0.6312429
ILMN_3167994 732.7953 0.09214334

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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