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Sample GSM1047480 Query DataSets for GSM1047480
Status Public on Dec 10, 2015
Title Pilocytic astrocytoma [PA13 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour PA13
Organism Homo sapiens
Characteristics tissue: Pilocytic astrocytoma
grade: I
Sex: M
age: 4
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
PA13.Detection Pval

Data table
ID_REF VALUE PA13.Detection Pval
ILMN_3167304 361.9202 0.7187123
ILMN_3168038 809.4923 0.000341598
ILMN_3167890 40046.05 3.68E-38
ILMN_3167526 624.1688 0.04003769
ILMN_3167209 278.3759 0.9067582
ILMN_3168219 772.4272 0.001080919
ILMN_3167464 807.5501 0.000363769
ILMN_3167213 387.7918 0.636542
ILMN_3167057 2352.968 3.68E-38
ILMN_3168313 353.0061 0.7447937
ILMN_3166972 392.2453 0.621596
ILMN_3168149 1349.805 1.26E-16
ILMN_3168527 413.3292 0.5487128
ILMN_3167562 354.6935 0.7399554
ILMN_3168099 3055.802 3.68E-38
ILMN_3168017 1448.218 6.07E-20
ILMN_3167545 492.0704 0.2819823
ILMN_3167951 721.6591 0.004446421
ILMN_3167172 425.1682 0.5068843
ILMN_3167994 605.3348 0.0567145

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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