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Sample GSM1047481 Query DataSets for GSM1047481
Status Public on Dec 10, 2015
Title Pilocytic astrocytoma [PA14 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour PA14
Organism Homo sapiens
Characteristics tissue: Pilocytic astrocytoma
grade: I
Sex: F
age: 6
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
PA14.Detection Pval

Data table
ID_REF VALUE PA14.Detection Pval
ILMN_3167304 396.937 0.6351212
ILMN_3168038 424.4257 0.5686266
ILMN_3167890 40378.24 3.68E-38
ILMN_3167526 402.1357 0.622788
ILMN_3167209 254.5411 0.8923983
ILMN_3168219 601.7624 0.1735038
ILMN_3167464 871.4153 0.004228736
ILMN_3167213 359.3134 0.7195963
ILMN_3167057 594.0541 0.1861915
ILMN_3168313 375.4626 0.6844789
ILMN_3166972 739.9325 0.03531744
ILMN_3168149 1256.376 2.21E-07
ILMN_3168527 456.686 0.4881749
ILMN_3167562 349.7098 0.7395414
ILMN_3168099 3141.214 3.68E-38
ILMN_3168017 1338.234 1.32E-08
ILMN_3167545 447.7353 0.5105888
ILMN_3167951 620.2602 0.1453619
ILMN_3167172 444.9298 0.5176107
ILMN_3167994 680.4678 0.07571374

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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