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Sample GSM1047485 Query DataSets for GSM1047485
Status Public on Dec 10, 2015
Title Diffuse astrocytoma [DA3 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour DA3
Organism Homo sapiens
Characteristics tissue: Diffuse astrocytoma
grade: II
Sex: M
age: 4
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
DA3.Detection Pval

Data table
ID_REF VALUE DA3.Detection Pval
ILMN_3167304 371.3786 0.7020405
ILMN_3168038 516.113 0.3190915
ILMN_3167890 38178.04 3.68E-38
ILMN_3167526 364.1825 0.7190506
ILMN_3167209 321.7284 0.8088046
ILMN_3168219 642.8146 0.08913482
ILMN_3167464 505.6688 0.3452996
ILMN_3167213 368.3018 0.7093709
ILMN_3167057 1080.669 6.14E-06
ILMN_3168313 376.8111 0.6888964
ILMN_3166972 547.3388 0.2463256
ILMN_3168149 1172.485 2.76E-07
ILMN_3168527 355.7397 0.738389
ILMN_3167562 358.3759 0.7324249
ILMN_3168099 3221.572 3.68E-38
ILMN_3168017 1528.801 4.02E-14
ILMN_3167545 391.1641 0.6530268
ILMN_3167951 576.1345 0.1880362
ILMN_3167172 465.5791 0.451881
ILMN_3167994 681.9835 0.0529534

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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