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Sample GSM1047489 Query DataSets for GSM1047489
Status Public on Dec 10, 2015
Title Glioblastoma [GBM2 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour GBM2
Organism Homo sapiens
Characteristics tissue: Glioblastoma
grade: IV
Sex: M
age: 10
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
GBM2.Detection Pval

Data table
ID_REF VALUE GBM2.Detection Pval
ILMN_3167304 421.7873 0.6633614
ILMN_3168038 435.4887 0.6204275
ILMN_3167890 41212.36 3.68E-38
ILMN_3167526 423.1679 0.6591195
ILMN_3167209 467.5963 0.5147564
ILMN_3168219 866.8781 0.00045702
ILMN_3167464 626.5994 0.09711799
ILMN_3167213 399.7794 0.7278935
ILMN_3167057 1883.643 1.06E-32
ILMN_3168313 485.5995 0.454549
ILMN_3166972 481.1153 0.4695018
ILMN_3168149 1333.363 2.38E-13
ILMN_3168527 442.7854 0.5969008
ILMN_3167562 340.312 0.8655936
ILMN_3168099 2393.538 3.68E-38
ILMN_3168017 1092.126 9.61E-08
ILMN_3167545 1084.418 1.36E-07
ILMN_3167951 741.869 0.01172363
ILMN_3167172 426.6075 0.6484647
ILMN_3167994 1072.484 2.30E-07

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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