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Sample GSM1047503 Query DataSets for GSM1047503
Status Public on Dec 10, 2015
Title Ependymoma [E11 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour E11
Organism Homo sapiens
Characteristics tissue: Ependymoma
grade: ND
Sex: F
age: nd
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
E11.Detection Pval

Data table
ID_REF VALUE E11.Detection Pval
ILMN_3167304 422.4893 0.6283527
ILMN_3168038 591.543 0.2475077
ILMN_3167890 39438.5 3.68E-38
ILMN_3167526 477.3623 0.4998837
ILMN_3167209 390.1775 0.6986457
ILMN_3168219 544.9719 0.3430479
ILMN_3167464 604.0838 0.2244452
ILMN_3167213 408.2572 0.660017
ILMN_3167057 1697.931 1.55E-13
ILMN_3168313 377.8085 0.7238764
ILMN_3166972 388.3337 0.7024719
ILMN_3168149 1261.453 1.41E-06
ILMN_3168527 375.4626 0.7285419
ILMN_3167562 388.895 0.7013095
ILMN_3168099 2918.828 3.68E-38
ILMN_3168017 1317.143 2.63E-07
ILMN_3167545 513.5898 0.414222
ILMN_3167951 904.9184 0.005319954
ILMN_3167172 497.8159 0.4512627
ILMN_3167994 659.1782 0.138657

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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