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Sample GSM1047507 Query DataSets for GSM1047507
Status Public on Dec 10, 2015
Title Medulloblastoma [M1 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour M1
Organism Homo sapiens
Characteristics tissue: Medulloblastoma
grade: IV
Sex: M
age: 4
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
M1.Detection Pval

Data table
ID_REF VALUE M1.Detection Pval
ILMN_3167304 394.1662 0.7298859
ILMN_3168038 428.704 0.6428673
ILMN_3167890 36832.93 3.68E-38
ILMN_3167526 2746.621 3.68E-38
ILMN_3167209 358.3759 0.8072303
ILMN_3168219 584.873 0.2273177
ILMN_3167464 474.6918 0.5152102
ILMN_3167213 368.3018 0.7872573
ILMN_3167057 11633.59 3.68E-38
ILMN_3168313 489.5403 0.472985
ILMN_3166972 438.0103 0.6178192
ILMN_3168149 910.4117 0.001071988
ILMN_3168527 390.1775 0.7392115
ILMN_3167562 596.5504 0.202988
ILMN_3168099 2589.291 3.68E-38
ILMN_3168017 1084.418 8.15E-06
ILMN_3167545 394.6176 0.72882
ILMN_3167951 685.1841 0.07171222
ILMN_3167172 500.2187 0.442778
ILMN_3167994 680.4678 0.07642759

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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