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Sample GSM1047513 Query DataSets for GSM1047513
Status Public on Dec 10, 2015
Title Medulloblastoma [M7 miRNA]
Sample type RNA
 
Source name Paediartric brain tumour M7
Organism Homo sapiens
Characteristics tissue: Medulloblastoma
grade: IV
Sex: M
age: 7
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit.
Label Cy3
Label protocol Cy3 Standard illumina prorocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in GenomeStudio
 
Submission date Nov 30, 2012
Last update date Dec 10, 2015
Contact name Denise Sheer
E-mail(s) d.sheer@qmul.ac.uk
Phone +442078822595
Organization name Barts & The London School of Medicine & Dentistry
Department Neuroscience & Trauma
Street address Blizard Institute, 4 Newark Street
City London
ZIP/Postal code E1 2AT
Country United Kingdom
 
Platform ID GPL8179
Series (2)
GSE42657 MicroRNA expression profiles for paediatric brain tumours
GSE42658 Expression profiles for paediatric brain tumours

Data table header descriptions
ID_REF
VALUE quantile normalized
M7.Detection Pval

Data table
ID_REF VALUE M7.Detection Pval
ILMN_3167304 345.7769 0.7886729
ILMN_3168038 424.4257 0.6070592
ILMN_3167890 31748.07 3.68E-38
ILMN_3167526 400.8513 0.6666113
ILMN_3167209 680.4678 0.07293383
ILMN_3168219 713.7562 0.04660749
ILMN_3167464 540.948 0.3036962
ILMN_3167213 444.9298 0.5530802
ILMN_3167057 1604.829 7.70E-15
ILMN_3168313 428.704 0.5959288
ILMN_3166972 395.7304 0.679068
ILMN_3168149 928.4799 0.000885766
ILMN_3168527 387.7918 0.6979827
ILMN_3167562 411.3768 0.6404358
ILMN_3168099 2574.637 3.68E-38
ILMN_3168017 1338.234 1.96E-09
ILMN_3167545 362.5279 0.7545595
ILMN_3167951 1118.62 5.23E-06
ILMN_3167172 588.2551 0.2025098
ILMN_3167994 533.761 0.3208396

Total number of rows: 1145

Table truncated, full table size 35 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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