|
Status |
Public on Apr 30, 2013 |
Title |
SCC 062209 TM/D |
Sample type |
RNA |
|
|
Source name |
SCC_tumor_invasive
|
Organism |
Homo sapiens |
Characteristics |
subject: patient 3 condition: invasive squamous cell carcinoma amplification: Double material: sliced section
|
Extracted molecule |
total RNA |
Extraction protocol |
QIAGEN Rneasy Kit
|
Label |
biotin
|
Label protocol |
Affymetrix double amplification protocol
|
|
|
Hybridization protocol |
Affymetrix protocol
|
Scan protocol |
Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
|
Data processing |
GCRMA (using gcrma package from R/Bioconductor)
|
|
|
Submission date |
Dec 03, 2012 |
Last update date |
Apr 30, 2013 |
Contact name |
Mayte Suarez-Farinas |
E-mail(s) |
mayte.suarezfarinas@mssm.edu
|
Organization name |
Mount SinaiSchool of Medicine
|
Street address |
1425 Madison Ave, L2-70C, Box 1077,
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10075 |
Country |
USA |
|
|
Platform ID |
GPL571 |
Series (1) |
GSE42677 |
Defining an invasion signature at the leading edge of cutaneous squamous cell carcinoma (SCC): IL-24 driven MMP-7 and MMP-13 expression. |
|