|
| Status |
Public on Dec 17, 2012 |
| Title |
NOFF [reps 1 and 2] |
| Sample type |
RNA |
| |
|
| Source name |
Olea europaea cv. Ayvalik
|
| Organism |
Olea europaea |
| Characteristics |
variety: Ayvalık
tissue: Leaf
tissue status: mature
year: off-year
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Leaves and fruits were collected, and transferred directly into liquid nitrogen. The total RNA extractions were performed using the RNeasy Plant Mini Kit (Qiagen, Germany).
|
| Label |
Cy3
|
| Label protocol |
Labeling was performed by following standard NimbleGen operating protocol.
|
| |
|
| Hybridization protocol |
Hybridization was performed by following standard NimbleGen operating protocol.
|
| Scan protocol |
Scaning was performed by following standard NimbleGen operating protocol.
|
| Description |
Leaf
Samples 7,8
|
| Data processing |
The raw data (.pair file) was subjected to RMA (Robust Multi-Array Analysis; Irizarry et al. Biostatistics 4(2):249), quantile normalization (Bolstad et al. Bioinformatics 19(2):185).
|
| |
|
| Submission date |
Dec 17, 2012 |
| Last update date |
Dec 17, 2012 |
| Contact name |
mine turktas |
| E-mail(s) |
mineturktas@gmail.com
|
| Organization name |
cankiri karatekin university
|
| Street address |
ballica campus
|
| City |
cankiri |
| ZIP/Postal code |
18100 |
| Country |
Turkey |
| |
|
| Platform ID |
GPL16379 |
| Series (1) |
| GSE42950 |
Nutrition metabolism plays an important role in the alternate bearing of the olive tree (Olea europaea L.) |
|
