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Sample GSM108 Query DataSets for GSM108
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-7, tumor 2 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=4
sex=f
age=70
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3624252 reuse=3 date=17-Feb-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 15679 15129 550
2 9321 15129 -5808
3 13811 15129 -1318
4 9149 15129 -5980
5 120628 15129 105499
6 228227 15129 213098
7 1380869 15129 1365740
8 12476 15129 -2653
9 9027 15129 -6102
10 7768 15129 -7361
11 138205 15129 123076
12 31471 15129 16342
13 966498 15129 951369
14 5910 15129 -9219
15 8503 15129 -6626
16 11041 15129 -4088
17 12350 12100 250
18 9676 12100 -2424
19 9992 12100 -2108
20 10430 12100 -1670

Total number of rows: 36864

Table truncated, full table size 849 Kbytes.




Supplementary data files not provided

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