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Sample GSM1080120 Query DataSets for GSM1080120
Status Public on Apr 04, 2013
Title insensitive rep2
Sample type RNA
 
Source name embryos 6-8h
Organism Drosophila melanogaster
Characteristics genotype: Insensitive mutant, insv[23B]
Growth protocol wt and insv flies were grown at 25 degrees before collecting embryos from. Embryos were aged under the same temperature.
Extracted molecule total RNA
Extraction protocol Trizol reagent from Invitrogen
Label biotin
Label protocol standand for Drosophila gene ChIP 2.0 (done at the Genomic Core Laboratory at Memorial Sloan-Kettering Cancer Center)
 
Hybridization protocol standand for Drosophila gene ChIP 2.0 (done at the Genomic Core Laboratory at Memorial Sloan-Kettering Cancer Center)
Scan protocol standand for Drosophila gene ChIP 2.0 (done at the Genomic Core Laboratory at Memorial Sloan-Kettering Cancer Center)
Data processing R/Bioconductor GCRMA
 
Submission date Feb 08, 2013
Last update date Apr 04, 2013
Contact name Jakub Orzechowski Westholm
E-mail(s) orzechoj@mskcc.org
Organization name Memorial Sloan-Kettering Cancer Center
Department Developmental Biology
Lab Eric Lai
Street address 1275 York Avenue, Box 252
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL1322
Series (2)
GSE44177 Expression in Drosophila Insensitive mutant
GSE44178 The BEN domain is a novel sequence-specific DNA binding domain conserved in neural transcriptional repressors

Data table header descriptions
ID_REF
VALUE log2 GCRMA signal

Data table
ID_REF VALUE
1616608_a_at 11.3
1622892_s_at 9.0
1622893_at 5.4
1622894_at 2.2
1622895_at 9.4
1622896_at 2.7
1622897_at 3.6
1622898_a_at 10.1
1622899_at 2.7
1622900_at 2.2
1622901_at 2.9
1622902_at 5.7
1622903_s_at 8.8
1622904_at 2.3
1622905_at 2.2
1622906_at 5.2
1622907_at 8.0
1622908_a_at 2.8
1622909_at 9.1
1622910_at 2.2

Total number of rows: 18952

Table truncated, full table size 288 Kbytes.




Supplementary file Size Download File type/resource
GSM1080120_QD5_insv6_8_2_Drosophila_2.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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