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GEO accession:
Sample GSM108094
Query DataSets for GSM108094
Status
Public on Jul 25, 2006
Title
Jurkat Biological Replicate 2
Sample type
RNA
Source name
Jurkat cell line
Organism
Homo sapiens
Characteristics
Untransfected Jurkat cell line
Treatment protocol
10 micromolar pronasterone A
Extracted molecule
total RNA
Label
biotin
Description
Gene expression data Jurkat cell line
Data processing
The data were analyzed with Gene Chip Operating System (GCOS) using Affymetrix default analysis settings and global scaling as normalization method
Submission date
May 05, 2006
Last update date
Jul 25, 2006
Contact name
Michael George
E-mail(s)
mdgeorge@ucdavis.edu
Organization name
University of California, Davis
Department
Medical Microbiology and Immunology
Street address
451 Health Sciences Drive
City
Davis
State/province
CA
ZIP/Postal code
95616
Country
USA
Platform ID
GPL570
Series (1)
GSE4785
Nef transfection of Jurkat T cells
Data table header descriptions
ID_REF
VALUE
GCOS-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
192.9
P
0.000754
AFFX-BioB-M_at
364
P
0.00007
AFFX-BioB-3_at
189.7
P
0.000095
AFFX-BioC-5_at
438.3
P
0.00006
AFFX-BioC-3_at
444.1
P
0.000044
AFFX-BioDn-5_at
554.6
P
0.000044
AFFX-BioDn-3_at
2216.7
P
0.000052
AFFX-CreX-5_at
5603.9
P
0.000044
AFFX-CreX-3_at
6466.5
P
0.000044
AFFX-DapX-5_at
5.4
A
0.41138
AFFX-DapX-M_at
3.5
A
0.659339
AFFX-DapX-3_at
1.2
A
0.979987
AFFX-LysX-5_at
5
A
0.574038
AFFX-LysX-M_at
7.7
A
0.645547
AFFX-LysX-3_at
17.2
A
0.195266
AFFX-PheX-5_at
0.9
A
0.910522
AFFX-PheX-M_at
1.6
A
0.60308
AFFX-PheX-3_at
19.2
A
0.368438
AFFX-ThrX-5_at
1.8
A
0.824672
AFFX-ThrX-M_at
1.3
A
0.737173
Total number of rows:
54675
Table truncated, full table size
1406 Kbytes
.
Supplementary data files not provided
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