|
| Status |
Public on Jan 07, 2015 |
| Title |
OSCC_28T |
| Sample type |
RNA |
| |
|
| Source name |
oral squamous cell carcinoma
|
| Organism |
Homo sapiens |
| Characteristics |
gender: male
age: 45
Stage: II
tissue: oral squamous cell carcinoma
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted from 40 pairs of OSCC patients using the miRNeasy Mini Kit (Qiagen, #217004) according to the manufacturer’s protocol.
|
| Label |
Cy3
|
| Label protocol |
Cy3 labled cRNA (PCR product) were prepared with illumina GoldenGate assay
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
replicate 1
|
| Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
| |
|
| Submission date |
Mar 18, 2013 |
| Last update date |
Jan 07, 2015 |
| Contact name |
Shine-Gwo Shiah |
| E-mail(s) |
davidssg@nhri.org.tw
|
| Organization name |
National Health Research Institutes
|
| Department |
National Institute of Cancer Research
|
| Street address |
No. 35, Keyan Rd.
|
| City |
Zhunan |
| State/province |
Miaoli County |
| ZIP/Postal code |
350 |
| Country |
Taiwan |
| |
|
| Platform ID |
GPL8179 |
| Series (1) |
| GSE45238 |
Identification of oral carcinoma miRNA involved in Wnt/b-catenin signaling |
|
