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Sample GSM1102405 Query DataSets for GSM1102405
Status Public on Mar 28, 2015
Title 177c
Sample type RNA
 
Source name PBMC
Organism Homo sapiens
Characteristics cell type: Primary peripheral blood mononuclear cells
child_stress: 2
parent_stress: 2
age: N/A
male: N/A
ethnic_group: N/A
bmi: N/A
alcohol: N/A
smoke: N/A
cd3e: N/A
cd3d: N/A
cd19: N/A
cd4: N/A
cd8a: N/A
fcgr3a: N/A
ncam1: N/A
cd14: N/A
pwb_total: N/A
pwb_purpose: N/A
pwb_environmental_mastery: N/A
pwb_self_accept: N/A
pwb_autonomy: N/A
pwb_growth: N/A
pwb_relationship: N/A
Extracted molecule total RNA
Extraction protocol Primary peripheral blood mononuclear cells were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina probe synthesis for gene expression profiling (carried out UCLA Neuroscience Genomics Core).
 
Hybridization protocol Standard Illumina hybridization protocol for gene expression profiling (carried out by UCLA Neuroscience Genomics Core).
Scan protocol Standard Illumina scan protocol for gene expression profiling (carried out by UCLA Neuroscience Genomics Core).
Description 6303230004_L.AVG_Signal
Illumina Human HT-12 BeadArray
Data processing Raw probe intensity values and quantile-normalized gene expression values were generated by Illumina GenomeStudio software using Gene Expression module 1.1.1. All available data are provided, with no additional filtering.
 
Submission date Mar 20, 2013
Last update date Mar 28, 2015
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL10904
Series (1)
GSE45329 Leukocyte gene expression variation as a function of perceived family stress and psychological well-being

Data table header descriptions
ID_REF
VALUE quantile-normalized gene expression values

Data table
ID_REF VALUE
7A5 127.9301
A1BG 148.4008
A1CF 131.4238
A26C3 130.1899
A2BP1 136.6992
A2LD1 325.0129
A2M 113.3454
A2ML1 123.1584
A3GALT2 137.4836
A4GALT 118.2285
A4GNT 188.9053
AAA1 130.6871
AAAS 222.1204
AACS 192.0844
AACSL 204.6196
AADAC 132.4031
AADACL1 335.6826
AADACL2 114.3539
AADACL3 123.9847
AADACL4 130.4167

Total number of rows: 34573

Table truncated, full table size 575 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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