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Sample GSM1104083 Query DataSets for GSM1104083
Status Public on Nov 15, 2013
Title Muscle_Subject01_Exercise_Day1_TechRep2of2
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to execise group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 1
protocol: exercise (baseline)
time: day 1
tech rep: 2of2
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the exercise group
Subject01_Day1_B
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) andrew.murton@nottingham.ac.uk
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 7.8438368
1053_at 6.209057509
117_at 4.835304181
121_at 7.582546855
1255_g_at 2.969029026
1294_at 6.561346877
1316_at 6.413141115
1320_at 4.676372227
1405_i_at 3.707819885
1431_at 4.016305062
1438_at 5.354626619
1487_at 10.13732158
1494_f_at 5.733313988
1552256_a_at 6.762622899
1552257_a_at 6.267136174
1552258_at 3.61460064
1552261_at 4.438439832
1552263_at 2.990629025
1552264_a_at 7.289675886
1552266_at 3.110769665

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104083_S2.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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