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Sample GSM1104103 Query DataSets for GSM1104103
Status Public on Nov 15, 2013
Title Muscle_Subject06_Control_Day2_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at day 2 in subjects assigned to control group
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 6
protocol: control (non-exercised)
time: day 2
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained on Day 2 from subjects assigned to the control (non-exercised) group
Subject06_Day2
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) andrew.murton@nottingham.ac.uk
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 7.622022218
1053_at 6.120148535
117_at 5.221488557
121_at 7.465787548
1255_g_at 2.896876554
1294_at 6.44247931
1316_at 6.046685669
1320_at 4.559188978
1405_i_at 4.003577268
1431_at 3.715500049
1438_at 5.327129563
1487_at 10.03603984
1494_f_at 5.511839381
1552256_a_at 6.757099853
1552257_a_at 6.459339721
1552258_at 3.36094378
1552261_at 4.553015984
1552263_at 3.04093942
1552264_a_at 6.975187799
1552266_at 3.141958862

Total number of rows: 54675

Table truncated, full table size 1211 Kbytes.




Supplementary file Size Download File type/resource
GSM1104103_S22.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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