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Sample GSM1104108 Query DataSets for GSM1104108
Status Public on Nov 15, 2013
Title Muscle_Subject08_Control_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to control group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 8
protocol: control (non-exercised)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the control (non-exercised) group
Subject08_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) andrew.murton@nottingham.ac.uk
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 7.518160618
1053_at 6.123941088
117_at 4.955211019
121_at 7.442741599
1255_g_at 2.810653787
1294_at 6.352281145
1316_at 7.062590564
1320_at 4.438059614
1405_i_at 3.627159998
1431_at 4.094958933
1438_at 5.142416184
1487_at 9.984230206
1494_f_at 5.600257903
1552256_a_at 7.059720758
1552257_a_at 6.254025679
1552258_at 3.543667071
1552261_at 4.290248334
1552263_at 3.174956895
1552264_a_at 6.907358975
1552266_at 3.159567762

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104108_S27.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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