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Sample GSM1104109 Query DataSets for GSM1104109
Status Public on Nov 15, 2013
Title Muscle_Subject08_Control_Day2_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at day 2 in subjects assigned to control group
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 8
protocol: control (non-exercised)
time: day 2
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained on Day 2 from subjects assigned to the control (non-exercised) group
Subject08_Day2
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) andrew.murton@nottingham.ac.uk
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.735790451
1053_at 6.338281624
117_at 5.045340594
121_at 7.45292478
1255_g_at 2.877021548
1294_at 6.27157539
1316_at 6.76216001
1320_at 4.399991062
1405_i_at 3.40498353
1431_at 4.010697675
1438_at 5.10022403
1487_at 9.958627002
1494_f_at 5.671257324
1552256_a_at 7.159053184
1552257_a_at 6.699994249
1552258_at 3.474003668
1552261_at 4.478123987
1552263_at 3.296381018
1552264_a_at 7.233459699
1552266_at 3.110058205

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104109_S28.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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