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Sample GSM1104113 Query DataSets for GSM1104113
Status Public on Nov 15, 2013
Title Muscle_Subject10_Control_Day1_TechRep1of1
Sample type RNA
 
Source name Vastus lateralis muscle at baseline in subjects assigned to control group (day1)
Organism Homo sapiens
Characteristics tissue: Vastus lateralis muscle
gender: Male
subject: 10
protocol: control (non-exercised)
time: day 1
tech rep: 1of1
Extracted molecule total RNA
Extraction protocol Total RNA extracted using Trizol according to manufacturer's protocol (Sigma, UK)
Label biotin
Label protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
 
Hybridization protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Scan protocol Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA)
Description Gene expression data from vastus lateralis samples obtained at baseline in subjects assigned to the control (non-exercised) group
Subject10_Day1
Data processing Background corrected by RMA on PM data; quantile normalised; summarisation by median polish regression method. All performed in Bioconductor v2.5
 
Submission date Mar 22, 2013
Last update date Nov 16, 2013
Contact name Andrew Murton
E-mail(s) andrew.murton@nottingham.ac.uk
Organization name The University of Nottingham
Department Division of Nutritional Sciences
Street address Sutton Bonington Campus
City Loughborough
State/province Leicestershire
ZIP/Postal code LE12 5RD
Country United Kingdom
 
Platform ID GPL570
Series (1)
GSE45426 Transcriptional events in human skeletal muscle at the outset of concentric resistance exercise training

Data table header descriptions
ID_REF
VALUE Log2 of the background corrected, normalised and summarized data

Data table
ID_REF VALUE
1007_s_at 8.540890748
1053_at 6.068378949
117_at 4.997416917
121_at 7.916459941
1255_g_at 2.992608472
1294_at 6.501288164
1316_at 6.876711136
1320_at 5.035045017
1405_i_at 3.735366206
1431_at 4.192588076
1438_at 5.61370029
1487_at 9.495320609
1494_f_at 6.134401576
1552256_a_at 6.811238226
1552257_a_at 6.758984178
1552258_at 3.852297397
1552261_at 4.304879126
1552263_at 2.849232785
1552264_a_at 7.309613339
1552266_at 3.275587288

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1104113_S32.CEL.gz 4.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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