|
| Status |
Public on Aug 10, 2013 |
| Title |
PanTro2 (6 of 9) |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
fibroblast cell line PR001171
|
| Organism |
Pan troglodytes |
| Characteristics |
cell type: fibroblast cell line
coriell id: PR001171
|
| Growth protocol |
standard for fibroblast cell lines
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
standard DNA extraction from cell lines using cell lysis
|
| Label |
Cy5
|
| Label protocol |
Agilent recommended protocol
|
| |
|
| Channel 2 |
| Source name |
fibroblast cell line PR00818
|
| Organism |
Pan troglodytes |
| Characteristics |
cell type: fibroblast cell line
coriell id: PR00818
|
| Growth protocol |
standard for fibroblast cell lines
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
standard DNA extraction from cell lines using cell lysis
|
| Label |
Cy3
|
| Label protocol |
Agilent recommended protocol
|
| |
|
| |
| Hybridization protocol |
Agilent recommended protocol
|
| Scan protocol |
scan at 3 uM resolution
|
| Description |
Dye bias correction was performed using default settings in Agilent Feature Extraction.
|
| Data processing |
Agilent Feature Extraction software
|
| |
|
| Submission date |
Apr 03, 2013 |
| Last update date |
Aug 10, 2013 |
| Contact name |
Charles Lee |
| E-mail(s) |
clee@rics.bwh.harvard.edu
|
| Organization name |
Brigham and Women's Hospital/Harvard Medical School
|
| Department |
Pathology
|
| Lab |
Lee Lab--Molecular Genetic Research Unit
|
| Street address |
221 Longwood Ave., EBRC-422
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
|
| Platform ID |
GPL16905 |
| Series (1) |
| GSE45741 |
Primate genome architecture linked with formation mechanisms and functional consequences of structural variation |
|
