NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM113189 Query DataSets for GSM113189
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT2 Replicate 2
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 2 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT2 Replicate 2
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.00940196023582232
2 0.859730750702359
3 -0.513704931664063
4 0.110493688355174
5 -0.614146369318194
6 0.667829372575655
7 0.0602248242609828
8 -0.437393022480983
9 -1.03620581998998
10 -0.0305847823792148
11 0.0680959360272448
12 -0.174381125624724
13 -0.059748836678218
14 0.109643241680594
15 -0.712022483554242
16 -0.162236345898869
17 0.207210166435812
18 0.35591331397225
19 0.046603775763279
20 0.11076987863744

Total number of rows: 8084

Table truncated, full table size 185 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap