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Sample GSM113248 Query DataSets for GSM113248
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT22 Replicate 7
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 22 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT22 Replicate 7
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.335395536470909
2 -0.40965206117567
3 -0.0601787587281557
4 0.398841621167821
5 -0.326589165455669
6 2.25457267380257
7 0.246995225048743
8 0.035096161178861
9 0.325168012525212
10 -0.110605356934278
11 0.0478584922026195
12 -0.227817909122385
13 -0.167927293071411
14 0.705974803678338
15 -0.752706077962433
16 -0.265918180151297
17 -0.897704285002141
18 -0.141214431727278
19 -0.302955046136164
20 -0.172772375697523

Total number of rows: 8084

Table truncated, full table size 181 Kbytes.




Supplementary data files not provided

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