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Sample GSM113249 Query DataSets for GSM113249
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT22 Replicate 8
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 22 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT22 Replicate 8
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 0.0199844735062534
2 -0.296285374955134
3 0.126567803015807
4 -0.0520023562388157
5 -0.247053248587776
6 0.163314053303043
7 -0.23186097538439
8 0.0330872302059338
9 -0.44187513095478
10 0.353702019173909
11 -0.05657278535379
12 -0.102396025216038
13 -0.0194707915597482
14 0.118052688185761
15 0.00429217542195972
16 0.200605138767903
17 -0.0550531326768003
18 1.01644501458971
19 0.00390675867064193
20 -0.0267650085201551

Total number of rows: 8084

Table truncated, full table size 185 Kbytes.




Supplementary data files not provided

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