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Sample GSM113259 Query DataSets for GSM113259
Status Public on Jul 04, 2008
Title Pineal Culture LD ZT6 Replicate 9
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 6 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after lights on
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture LD ZT6 Replicate 9
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 06, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.0172840727190173
2 -0.21380173477625
3 -0.520513567379035
4 -0.127730308639227
5 -0.65163801099855
6 -0.36712824697549
7 -0.563442600852611
8 -0.376300645744293
9 -0.357788477973411
10 -0.503702338047148
11 -0.282785679373241
12 -0.531470503657328
13 -0.193179248774753
14 -1.71988802481042
15 0.178772181875398
16 0.0272901142090278
17 0.0267628583958436
18 -0.819296516308914
19 -0.0241054560005442
20 0.895672836337118

Total number of rows: 8084

Table truncated, full table size 184 Kbytes.




Supplementary data files not provided

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