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GEO accession:
Sample GSM113369
Query DataSets for GSM113369
Status
Public on Jul 27, 2006
Title
25 uM cyfluthrin batch 2
Sample type
RNA
Source name
25 uM cyfluthrin batch 2
Organism
Homo sapiens
Characteristics
astrocytes from second trimester human fetal brains
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
astrocytes from second trimester (14-19 weeks) human fetal brains
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Jun 08, 2006
Last update date
Jul 27, 2006
Contact name
Sarah Mense
E-mail(s)
smm2123@columbia.edu
Organization name
Columbia University
Department
Environmental Health Sciences
Lab
Dr. Zhang
Street address
722 West 168th Street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL570
Series (1)
GSE5023
The Insecticides Cyfluthrin & Chlorpyrifos Alter Expression of Genes with Diverse Functions in Primary Human Astrocytes
Data table header descriptions
ID_REF
Affymetrix ID reference
VALUE
GCOS 1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
198
P
0.001409
AFFX-BioB-M_at
284.6
P
0.000225
AFFX-BioB-3_at
123.3
P
0.006187
AFFX-BioC-5_at
491.7
P
0.00011
AFFX-BioC-3_at
424.3
P
0.000052
AFFX-BioDn-5_at
985.6
P
0.000044
AFFX-BioDn-3_at
3346.1
P
0.000195
AFFX-CreX-5_at
5674.9
P
0.000044
AFFX-CreX-3_at
8266.4
P
0.000044
AFFX-DapX-5_at
8
A
0.686277
AFFX-DapX-M_at
20.4
A
0.239063
AFFX-DapX-3_at
8.5
A
0.772364
AFFX-LysX-5_at
14.9
A
0.227597
AFFX-LysX-M_at
5.9
A
0.783476
AFFX-LysX-3_at
17.3
A
0.116113
AFFX-PheX-5_at
10.3
A
0.58862
AFFX-PheX-M_at
29
A
0.440646
AFFX-PheX-3_at
13.6
A
0.876428
AFFX-ThrX-5_at
27.6
A
0.354441
AFFX-ThrX-M_at
2.3
A
0.966335
Total number of rows:
54675
Table truncated, full table size
1430 Kbytes
.
Supplementary data files not provided
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