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Sample GSM114 Query DataSets for GSM114
Status Public on Jul 19, 2001
Title Renal cell carcinoma: rccc-9, tumor 1 (part 1 of 2)
Sample type RNA
 
Source name renal clear cell carcinoma (primary tumor)
Organism Homo sapiens
Extracted molecule total RNA
 
Description clinical.stage=III
grade.of.malignancy=2
type=clearcell
tumor.site=kidney
multiplefoci=FALSE
survival.months=NA
died=NA
tumorsize.cm=7.5
sex=f
age=59
RNA=poly-A+
For spot quality assessment / error bars, use duplicate spots (each clone is spotted twice) and foreground/background ratio
Keywords = renal clear cell carcinoma
Keywords = kidney
Lot batch = batch=ReImage3_nov99 filter=3625210 reuse=4 date=13-Jan-2000
 
Submission date Jul 19, 2001
Last update date May 27, 2005
Contact name Wolfgang Huber
E-mail(s) w.huber@dkfz.de
Phone +49-6221-424709
Fax +49-6221-423470
URL http://www.dkfz-heidelberg.de/abt0840
Organization name German Cancer Research Center
Department Molecular Genome Analysis
Street address Im Neuenheimer Feld 280
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL9
Series (1)
GSE3 Renal Cell Carcinoma Differential Expression

Data table header descriptions
ID_REF
SIGNAL_RAW Mean spot intensity
BKD_RAW 33 percent quantile of intensities of surrounding pixels within a 4x4 block
VALUE SIGNAL_RAW-SIGNAL_BKD

Data table
ID_REF SIGNAL_RAW BKD_RAW VALUE
1 14271 29241 -14970
2 13368 29241 -15873
3 18029 29241 -11212
4 15494 29241 -13747
5 154271 29241 125030
6 454168 29241 424927
7 330653 29241 301412
8 162160 29241 132919
9 166058 29241 136817
10 16244 29241 -12997
11 132248 29241 103007
12 11881 29241 -17360
13 337878 29241 308637
14 7964 29241 -21277
15 10408 29241 -18833
16 12797 29241 -16444
17 12553 16384 -3831
18 16804 16384 420
19 12466 16384 -3918
20 8369 16384 -8015

Total number of rows: 36864

Table truncated, full table size 853 Kbytes.




Supplementary data files not provided

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