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Sample GSM114285 Query DataSets for GSM114285
Status Public on Jul 04, 2008
Title Pineal Culture DD CT14 Replicate 5
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 14 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT14 Replicate 5
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 13, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.741646906910524
2 -0.229015130346294
3 -0.170694612441052
4 -0.248151573953601
5 -0.236079359272496
6 -0.721883543097759
7 0.0680898638982933
8 -1.319039382895
9 -0.764416140371804
10 -0.366924217327911
11 -1.0712544504612
12 -0.213499084064228
13 -0.618115592213864
14 -0.0461841577557507
15 -1.01931420277196
16 -0.143211234348888
17 -0.543778315406943
18 -0.257809662432368
19 -0.298646091580014
20 0.0558780333915163

Total number of rows: 8084

Table truncated, full table size 183 Kbytes.




Supplementary data files not provided

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