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Sample GSM114286 Query DataSets for GSM114286
Status Public on Jul 04, 2008
Title Pineal Culture DD CT14 Replicate 6
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 14 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT14 Replicate 6
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 13, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -1.0204512178557
2 -0.424035500417809
3 -0.483876372309608
4 -0.339243964311912
5 0.0686425568005929
6 -0.236635155079221
7 0.170146406197064
8 -0.0284283844046052
9 -0.531690182712048
10 -0.271358234229748
11 -0.25270967833258
12 -0.26639688456115
13 -0.87942254335365
14 0.296472374295748
15 -0.293228760255977
16 -0.204350747443612
17 -0.454033119455362
18 0.495802093571256
19 -0.16504392638575
20 -0.863271949497593

Total number of rows: 8084

Table truncated, full table size 184 Kbytes.




Supplementary data files not provided

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