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Sample GSM114289 Query DataSets for GSM114289
Status Public on Jul 04, 2008
Title Pineal Culture DD CT18 Replicate 1
Sample type RNA
 
Channel 1
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Chick pinealocytes; 18 hours after beginning of subjective day
Organism Gallus gallus
Characteristics Strain: WL-36
Gender: Male
Developmental Age: P1
Tissue of origin: Pineal gland
Extracted molecule total RNA
Label Cy3
 
 
Description Pineal Culture DD CT18 Replicate 1
Data processing GenePixPro was used to generate a .gpr file, which was analyzed using GeneSpring software. Data were then subjected to LOWESS normalization, and each time-point was reported as the normalized ratio of Cy5 to Cy3 intensity.
 
Submission date Jun 13, 2006
Last update date Jul 05, 2007
Contact name Phillip D. Beremand
E-mail(s) beremand@mail.bio.tamu.edu
Phone 979-845-0663
Fax 979-847-8805
Organization name Texas A&M University
Department Biology
Lab Laboratory for Functional Genomics
Street address
City College Station
State/province TX
ZIP/Postal code 77843-3258
Country USA
 
Platform ID GPL3731
Series (1)
GSE5292 Circadian Transcriptome of the Chicken Pineal In Vitro

Data table header descriptions
ID_REF
VALUE Natural logarithm of ratio of cy5 to cy3

Data table
ID_REF VALUE
1 -0.286821109853134
2 -0.743403539067169
3 -0.695234798117913
4 -0.45400846073807
5 -0.312107342114791
6 -1.26342002371938
7 -0.640991827851464
8 -0.45488694424033
9 0.25424136284794
10 -0.298199049151721
11 -0.227159228363543
12 -0.772747144592247
13 -0.569875059755937
14 -0.156628664162707
15 0.011198660276566
16 -0.209409484362085
17 -0.00606056819831872
18 -0.128859124687571
19 -0.0444770515269604
20 0.170684525093675

Total number of rows: 8084

Table truncated, full table size 185 Kbytes.




Supplementary data files not provided

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